Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFG54_RS20385 | Not Available | Positive | 4523474 - 4523821 | 13478.1 |
| inner membrane protein yiaa | DFG54_RS20390 | Not Available | Negative | 4523861 - 4524295 | 15387.9 |
| pqq-dependent sugar dehydrogenase | DFG54_RS20395 | Not Available | Positive | 4524466 - 4525644 | 41820.7 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | DFG54_RS20400 | Not Available | Negative | 4525969 - 4528140 | 77622.4 |
| dihydroneopterin aldolase | DFG54_RS20405 | Not Available | Negative | 4528396 - 4528749 | 13331.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DFG54_RS20410 | Not Available | Negative | 4528844 - 4529908 | 37130.6 |
| 30s ribosomal protein s21 | DFG54_RS20415 | Not Available | Positive | 4530189 - 4530404 | 8614.48 |
| gatb/yqey domain-containing protein | DFG54_RS20420 | Not Available | Positive | 4530631 - 4531077 | 15890.5 |
| yihy/virulence factor brkb family protein | DFG54_RS20425 | Not Available | Positive | 4531916 - 4532863 | 34279.4 |
| dna primase | DFG54_RS20430 | Not Available | Positive | 4532944 - 4534692 | 65280.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

