Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | DFG54_RS20225 | Not Available | Negative | 4489705 - 4491936 | 80026.3 |
| glycerophosphodiester phosphodiesterase | DFG54_RS20230 | Not Available | Negative | 4492313 - 4492873 | 17924.5 |
| lysm peptidoglycan-binding domain-containing protein | DFG54_RS20235 | Not Available | Negative | 4492945 - 4493241 | 10593.2 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DFG54_RS20240 | Not Available | Negative | 4493346 - 4494161 | 29696.3 |
| m20 family metallopeptidase | DFG54_RS20245 | Not Available | Negative | 4494336 - 4495640 | 45985.4 |
| efflux rnd transporter periplasmic adaptor subunit | DFG54_RS20250 | Not Available | Positive | 4495900 - 4497138 | 43580.9 |
| efflux rnd transporter permease subunit | DFG54_RS20255 | Not Available | Positive | 4497232 - 4500480 | 115389.0 |
| efflux rnd transporter permease subunit | DFG54_RS20260 | Not Available | Positive | 4500608 - 4503748 | 111324.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 4503753 - 4503827 | Not Available |
| ycii family protein | DFG54_RS20275 | Not Available | Positive | 4504082 - 4504501 | 14962.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

