Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DFG54_RS20025 | Not Available | Positive | 4444389 - 4445213 | 31017.8 |
| o-antigen ligase family protein | DFG54_RS20030 | Not Available | Negative | 4445198 - 4446487 | 45786.7 |
| arnt family glycosyltransferase | DFG54_RS20035 | Not Available | Negative | 4446627 - 4448348 | 64078.6 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | DFG54_RS20040 | Not Available | Negative | 4448370 - 4449680 | 47050.4 |
| methionyl-trna formyltransferase | DFG54_RS20045 | Not Available | Negative | 4449680 - 4450603 | 32657.7 |
| peptide deformylase | DFG54_RS20050 | Not Available | Negative | 4450999 - 4451511 | 19048.1 |
| lysm peptidoglycan-binding domain-containing protein | DFG54_RS20055 | Not Available | Positive | 4451643 - 4452779 | 41357.1 |
| dna-processing protein dpra | DFG54_RS20060 | Not Available | Positive | 4452852 - 4453988 | 39917.0 |
| duf494 family protein | DFG54_RS20065 | Not Available | Positive | 4454032 - 4454505 | 18114.5 |
| pilin | DFG54_RS20070 | Not Available | Positive | 4454546 - 4455286 | 25920.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

