Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase gale | DFG54_RS19765 | Not Available | Positive | 4393030 - 4394181 | 42215.6 |
| glycosyltransferase family 1 protein | DFG54_RS19770 | Not Available | Positive | 4394217 - 4395401 | 44021.0 |
| udp-galactopyranose mutase | DFG54_RS19775 | Not Available | Positive | 4395389 - 4396585 | 45800.8 |
| beta-glucosidase | DFG54_RS19780 | Not Available | Positive | 4396679 - 4397830 | 43225.9 |
| abc transporter atp-binding protein | DFG54_RS19785 | Not Available | Positive | 4397827 - 4399611 | 64133.6 |
| duf3606 domain-containing protein | DFG54_RS19790 | Not Available | Negative | 4400377 - 4400556 | 6862.9 |
| glycerophosphodiester phosphodiesterase | DFG54_RS19795 | Not Available | Negative | 4400604 - 4401225 | 21511.3 |
| zinc-dependent alcohol dehydrogenase | DFG54_RS19800 | Not Available | Positive | 4401467 - 4402630 | 41680.3 |
| Ncrna_class:other | Not Available | Not Available | Positive | 4402746 - 4402819 | Not Available |
| hypothetical protein | DFG54_RS23445 | Not Available | Negative | 4402881 - 4403048 | 6058.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

