Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFG54_RS19560 | Not Available | Negative | 4350281 - 4350835 | 20769.2 |
| duf3297 family protein | DFG54_RS19565 | Not Available | Positive | 4351001 - 4351267 | 9707.33 |
| abc transporter permease | DFG54_RS19570 | Not Available | Negative | 4351830 - 4352591 | 27752.8 |
| abc transporter atp-binding protein | DFG54_RS19575 | Not Available | Negative | 4352588 - 4353532 | 34539.8 |
| na+/h+ antiporter | DFG54_RS19580 | Not Available | Negative | 4353945 - 4355582 | 59065.7 |
| ycii family protein | DFG54_RS19585 | Not Available | Positive | 4355743 - 4356195 | 16116.2 |
| fasciclin domain-containing protein | DFG54_RS19590 | Not Available | Positive | 4356276 - 4356833 | 18587.8 |
| udgx family uracil-dna binding protein | DFG54_RS19595 | Not Available | Negative | 4357190 - 4358608 | 53049.6 |
| putative dna modification/repair radical sam protein | DFG54_RS19605 | Not Available | Negative | 4359110 - 4360354 | 46595.1 |
| doda-type extradiol aromatic ring-opening family dioxygenase | DFG54_RS19610 | Not Available | Negative | 4360596 - 4361414 | 29252.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

