Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5-like element is1478 family transposase | DFG54_RS19405 | Not Available | Positive | 4319935 - 4321302 | 51779.1 |
| metq/nlpa family abc transporter substrate-binding protein | DFG54_RS19410 | Not Available | Negative | 4321462 - 4322262 | 28871.4 |
| methionine abc transporter permease | DFG54_RS19415 | Not Available | Negative | 4322464 - 4323156 | 24263.9 |
| methionine abc transporter atp-binding protein | DFG54_RS19420 | Not Available | Negative | 4323159 - 4324166 | 36480.1 |
| dmt family transporter | DFG54_RS19425 | Not Available | Negative | 4324320 - 4325228 | 32419.0 |
| yajq family cyclic di-gmp-binding protein | DFG54_RS19430 | Not Available | Positive | 4325486 - 4325971 | 18202.8 |
| duf1415 domain-containing protein | DFG54_RS19435 | Not Available | Positive | 4326141 - 4326701 | 20616.2 |
| hypothetical protein | DFG54_RS19440 | Not Available | Negative | 4326829 - 4328262 | 51374.1 |
| tonb-dependent receptor | DFG54_RS19445 | Not Available | Negative | 4328262 - 4330865 | 95353.9 |
| sdr family oxidoreductase | DFG54_RS19450 | Not Available | Positive | 4331113 - 4331919 | 28296.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

