Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphohexose mutase | DFG54_RS18940 | Not Available | Positive | 4224870 - 4226216 | 48894.0 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | DFG54_RS18945 | Not Available | Positive | 4226262 - 4227665 | 50964.4 |
| dtdp-4-dehydrorhamnose reductase | DFG54_RS18950 | Not Available | Negative | 4227787 - 4228695 | 32215.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DFG54_RS18955 | Not Available | Negative | 4228692 - 4229249 | 20518.3 |
| glucose-1-phosphate thymidylyltransferase rfba | DFG54_RS18960 | Not Available | Negative | 4229246 - 4230133 | 32509.8 |
| dtdp-glucose 4,6-dehydratase | DFG54_RS18965 | Not Available | Negative | 4230197 - 4231252 | 38575.4 |
| electron transfer flavoprotein subunit beta/fixa family protein | DFG54_RS18970 | Not Available | Positive | 4231481 - 4232227 | 26497.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DFG54_RS18975 | Not Available | Positive | 4232227 - 4233171 | 31836.2 |
| hypothetical protein | DFG54_RS18980 | Not Available | Positive | 4233258 - 4233578 | 12439.9 |
| degt/dnrj/eryc1/strs family aminotransferase | DFG54_RS18985 | Not Available | Positive | 4233627 - 4234730 | 38822.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

