Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein j | DFG54_RS18730 | Not Available | Negative | 4171842 - 4172480 | 22902.7 |
| type ii secretion system protein xpsi | DFG54_RS18735 | Not Available | Negative | 4172477 - 4172893 | 15126.2 |
| type ii secretion system protein xpsh | DFG54_RS18740 | Not Available | Negative | 4172890 - 4173399 | 18236.3 |
| type ii secretion system major pseudopilin gspg | DFG54_RS18745 | Not Available | Negative | 4173410 - 4173841 | 15149.2 |
| type ii secretion system protein xpsf | DFG54_RS18750 | Not Available | Negative | 4174106 - 4175323 | 44026.4 |
| type ii secretion system atpase gspe | DFG54_RS18755 | Not Available | Negative | 4175538 - 4177265 | 63941.4 |
| s8 family peptidase | DFG54_RS18760 | Not Available | Negative | 4177397 - 4179277 | 63809.0 |
| espr-type extended signal peptide-containing protein | DFG54_RS18765 | Not Available | Negative | 4179436 - 4186491 | 220274.0 |
| glycerophosphodiester phosphodiesterase | DFG54_RS18770 | Not Available | Negative | 4187024 - 4187128 | 3536.21 |
| phosphoribosylformylglycinamidine synthase | DFG54_RS18775 | Not Available | Negative | 4187991 - 4192037 | 144287.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

