Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubih/ubif family hydroxylase | DFG54_RS17990 | Not Available | Negative | 4016613 - 4017794 | 42512.8 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | DFG54_RS17995 | Not Available | Negative | 4017791 - 4018999 | 42627.2 |
| hypothetical protein | DFG54_RS18005 | Not Available | Positive | 4019193 - 4019771 | 21214.9 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DFG54_RS18010 | Not Available | Positive | 4019773 - 4020330 | 20013.8 |
| histone deacetylase family protein | DFG54_RS18015 | Not Available | Positive | 4020369 - 4021277 | 32626.7 |
| lps-assembly protein lptd | DFG54_RS18020 | Not Available | Positive | 4021408 - 4023837 | 91898.3 |
| peptidylprolyl isomerase | DFG54_RS18025 | Not Available | Positive | 4023834 - 4025225 | 49927.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DFG54_RS18030 | Not Available | Positive | 4025230 - 4026198 | 33446.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | DFG54_RS18035 | Not Available | Positive | 4026765 - 4027553 | 28457.6 |
| co2+/mg2+ efflux protein apag | DFG54_RS18040 | Not Available | Positive | 4027631 - 4028014 | 14208.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

