Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-hydroxycinnamoyl coa hydratase/lyase | DFG54_RS17940 | Not Available | Positive | 4006269 - 4007096 | 31117.1 |
| glycerophosphodiester phosphodiesterase | DFG54_RS17945 | Not Available | Positive | 4007183 - 4008651 | 51269.9 |
| amp-binding protein | DFG54_RS17950 | Not Available | Positive | 4008867 - 4010345 | 53495.3 |
| lysr substrate-binding domain-containing protein | DFG54_RS17955 | Not Available | Negative | 4010677 - 4011678 | 36789.9 |
| protocatechuate 4,5-dioxygenase subunit alpha | DFG54_RS17960 | Not Available | Negative | 4011751 - 4012110 | 14194.2 |
| gallate dioxygenase | DFG54_RS17965 | Not Available | Negative | 4012120 - 4013019 | 33286.6 |
| gntr family transcriptional regulator | DFG54_RS17970 | Not Available | Positive | 4013256 - 4013930 | 24610.7 |
| transporter | DFG54_RS17975 | Not Available | Negative | 4014105 - 4015052 | 34693.4 |
| nuclear transport factor 2 family protein | DFG54_RS17980 | Not Available | Negative | 4015248 - 4015679 | 15833.8 |
| alpha/beta fold hydrolase | DFG54_RS17985 | Not Available | Negative | 4015794 - 4016510 | 25672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

