Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 30 beta sandwich domain-containing protein | DFG54_RS17690 | Not Available | Negative | 3957911 - 3959128 | 43311.2 |
| asparaginase domain-containing protein | DFG54_RS17695 | Not Available | Positive | 3959544 - 3960029 | 17729.4 |
| cys-trna(pro) deacylase | DFG54_RS17700 | Not Available | Positive | 3960033 - 3960506 | 16785.5 |
| s8 family peptidase | DFG54_RS17705 | Not Available | Negative | 3960632 - 3962329 | 56796.0 |
| glycerophosphodiester phosphodiesterase | DFG54_RS17710 | Not Available | Negative | 3962668 - 3964067 | 50100.5 |
| s8 family peptidase | DFG54_RS17715 | Not Available | Negative | 3964304 - 3966046 | 57231.7 |
| branched-chain amino acid aminotransferase | DFG54_RS17720 | Not Available | Negative | 3966360 - 3967445 | 38982.4 |
| putative fe-s cluster assembly protein suft | DFG54_RS17725 | Not Available | Negative | 3967510 - 3968064 | 20213.9 |
| hypothetical protein | DFG54_RS17730 | Not Available | Positive | 3968238 - 3968657 | 14539.2 |
| rna polymerase sigma factor | DFG54_RS17735 | Not Available | Positive | 3969008 - 3969571 | 21095.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

