Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase/peroxidase hpi | DFG54_RS15850 | Not Available | Positive | 3570472 - 3572718 | 81597.4 |
| rna-binding s4 domain-containing protein | DFG54_RS15855 | Not Available | Negative | 3573051 - 3573458 | 14996.0 |
| mate family efflux transporter | DFG54_RS15860 | Not Available | Positive | 3574004 - 3575479 | 51672.4 |
| 50s ribosomal protein l19 | DFG54_RS15865 | Not Available | Negative | 3576582 - 3576989 | 14738.8 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DFG54_RS15870 | Not Available | Negative | 3577134 - 3577892 | 27986.4 |
| ribosome maturation factor rimm | DFG54_RS15875 | Not Available | Negative | 3577957 - 3578469 | 19161.9 |
| 30s ribosomal protein s16 | DFG54_RS15880 | Not Available | Negative | 3578513 - 3578773 | 9633.59 |
| aminotransferase class iv family protein | DFG54_RS15885 | Not Available | Negative | 3578882 - 3579679 | 28841.8 |
| nad(p)h-dependent flavin oxidoreductase | DFG54_RS15890 | Not Available | Negative | 3579670 - 3580764 | 37424.5 |
| duf2314 domain-containing protein | DFG54_RS15895 | Not Available | Negative | 3580766 - 3581605 | 30899.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

