Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DFG54_RS15800 | Not Available | Negative | 3557796 - 3558851 | 38169.7 |
| sdr family oxidoreductase | DFG54_RS15805 | Not Available | Negative | 3558932 - 3559693 | 27028.7 |
| aminotransferase class v-fold plp-dependent enzyme | DFG54_RS15810 | Not Available | Negative | 3559720 - 3560967 | 44859.2 |
| nad(p)/fad-dependent oxidoreductase | DFG54_RS15815 | Not Available | Negative | 3561003 - 3562559 | 55806.9 |
| tryptophan 2,3-dioxygenase family protein | DFG54_RS15820 | Not Available | Negative | 3562600 - 3563412 | 30069.8 |
| tryptophan 2,3-dioxygenase family protein | DFG54_RS15825 | Not Available | Negative | 3563381 - 3563704 | 12220.6 |
| voc family protein | DFG54_RS15830 | Not Available | Negative | 3563775 - 3564305 | 19560.2 |
| is1595-like element isxca4 family transposase | DFG54_RS15835 | Not Available | Negative | 3564533 - 3565495 | 35971.6 |
| dna mismatch repair protein muts | DFG54_RS15840 | Not Available | Positive | 3566355 - 3569030 | 97937.1 |
| duf937 domain-containing protein | DFG54_RS15845 | Not Available | Positive | 3569550 - 3570164 | 20246.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

