Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpaa protein | DFG54_RS15750 | Not Available | Positive | 3546897 - 3547712 | 29125.7 |
| hrpd5 family protein | DFG54_RS15755 | Not Available | Positive | 3547709 - 3548656 | 33900.4 |
| hrpd6 family protein | DFG54_RS15760 | Not Available | Positive | 3548667 - 3548909 | 8787.39 |
| hrpe family protein | DFG54_RS15765 | Not Available | Positive | 3548995 - 3549267 | 9755.56 |
| cest family type iii secretion system chaperone | DFG54_RS15770 | Not Available | Positive | 3549323 - 3549805 | 17972.3 |
| pectate lyase | DFG54_RS15775 | Not Available | Positive | 3549981 - 3551066 | 37322.6 |
| glycerophosphodiester phosphodiesterase | DFG54_RS15780 | Not Available | Negative | 3551432 - 3552286 | 30807.6 |
| hrpf/nolx family t3ss translocon protein | DFG54_RS15785 | Not Available | Negative | 3552428 - 3555193 | 98902.6 |
| nadph-dependent f420 reductase | DFG54_RS15790 | Not Available | Negative | 3556203 - 3556937 | 25334.4 |
| tetr/acrr family transcriptional regulator | DFG54_RS15795 | Not Available | Positive | 3557129 - 3557713 | 20838.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

