Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | DFG54_RS23755 | Not Available | Positive | 3528700 - 3529114 | 15074.0 |
| hypothetical protein | DFG54_RS15650 | Not Available | Positive | 3529392 - 3530822 | 52731.1 |
| glycerophosphodiester phosphodiesterase | DFG54_RS15655 | Not Available | Positive | 3531256 - 3532022 | 27140.3 |
| lytic transglycosylase domain-containing protein | DFG54_RS15665 | Not Available | Negative | 3532100 - 3532582 | 17892.6 |
| xopa/hpa1 family type iii secretion system protein | DFG54_RS15670 | Not Available | Positive | 3533050 - 3533415 | 12797.1 |
| type iii secretion system outer membrane ring subunit sctc | DFG54_RS15675 | Not Available | Negative | 3533494 - 3535311 | 64001.8 |
| type iii secretion system export apparatus subunit sctt | DFG54_RS15680 | Not Available | Negative | 3535488 - 3536318 | 28994.9 |
| type iii secretion protein hrpb7 | DFG54_RS15685 | Not Available | Negative | 3536315 - 3536824 | 18751.1 |
| type iii secretion system atpase sctn | DFG54_RS15690 | Not Available | Negative | 3536817 - 3538145 | 47774.0 |
| type iii secretion system stator protein sctl | DFG54_RS15695 | Not Available | Negative | 3538135 - 3538836 | 25140.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

