Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFG54_RS15390 | Not Available | Positive | 3467983 - 3468348 | 13002.5 |
| glycerophosphodiester phosphodiesterase | DFG54_RS15395 | Not Available | Positive | 3468467 - 3468571 | 3841.81 |
| ligase-associated dna damage response exonuclease | DFG54_RS15400 | Not Available | Positive | 3468791 - 3469801 | 37094.7 |
| hypothetical protein | DFG54_RS15405 | Not Available | Positive | 3469798 - 3470031 | 8562.67 |
| atp-dependent dna ligase | DFG54_RS15410 | Not Available | Positive | 3470028 - 3471632 | 59842.9 |
| ligase-associated dna damage response dexh box helicase | DFG54_RS15415 | Not Available | Positive | 3471629 - 3474121 | 90925.8 |
| ligase-associated dna damage response endonuclease pdem | DFG54_RS15420 | Not Available | Positive | 3474111 - 3474755 | 23390.3 |
| fad-dependent oxidoreductase | DFG54_RS15425 | Not Available | Negative | 3474851 - 3476122 | 46645.1 |
| cold-shock protein | DFG54_RS15430 | Not Available | Negative | 3476219 - 3476425 | 7293.39 |
| s-methyl-5'-thioinosine phosphorylase | DFG54_RS15435 | Not Available | Negative | 3476512 - 3477264 | 26217.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

