Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | DFG54_RS14975 | Not Available | Positive | 3387706 - 3389052 | 48165.9 |
| outer membrane protein assembly factor bama | DFG54_RS14980 | Not Available | Positive | 3389136 - 3391505 | 87516.6 |
| hypothetical protein | DFG54_RS14985 | Not Available | Negative | 3391587 - 3391787 | 7131.18 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DFG54_RS14990 | Not Available | Positive | 3391915 - 3392928 | 34806.8 |
| 3-hydroxyacyl-acp dehydratase fabz | DFG54_RS14995 | Not Available | Positive | 3392925 - 3393386 | 17123.2 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DFG54_RS15000 | Not Available | Positive | 3393408 - 3394199 | 27844.2 |
| lipid-a-disaccharide synthase | DFG54_RS15005 | Not Available | Positive | 3394196 - 3395512 | 47375.6 |
| ribonuclease hii | DFG54_RS15010 | Not Available | Positive | 3395509 - 3396231 | 25906.1 |
| dna polymerase iii subunit alpha | DFG54_RS15015 | Not Available | Positive | 3396468 - 3400058 | 132465.0 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | DFG54_RS15020 | Not Available | Positive | 3400213 - 3401172 | 35201.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

