Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-dipeptidase dcp | DFG54_RS01010 | Not Available | Positive | 224286 - 226454 | 80067.0 |
| type iii secretion system effector xopn | DFG54_RS01015 | Not Available | Negative | 226579 - 228738 | 76292.7 |
| mbl fold metallo-hydrolase | DFG54_RS01020 | Not Available | Negative | 229150 - 230202 | 38629.1 |
| tetr/acrr family transcriptional regulator | DFG54_RS01025 | Not Available | Positive | 230291 - 230923 | 22989.6 |
| voc family protein | DFG54_RS01030 | Not Available | Negative | 231145 - 231519 | 13401.6 |
| helix-turn-helix domain-containing protein | DFG54_RS01035 | Not Available | Negative | 231560 - 232285 | 25837.3 |
| lysr family transcriptional regulator | DFG54_RS01040 | Not Available | Negative | 232332 - 233288 | 35408.9 |
| malate synthase a | DFG54_RS01045 | Not Available | Positive | 233409 - 235031 | 59275.4 |
| isocitrate lyase | DFG54_RS01050 | Not Available | Positive | 235217 - 236512 | 46749.2 |
| ggdef domain-containing protein | DFG54_RS01055 | Not Available | Positive | 236703 - 237746 | 37828.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

