Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-inducible transcriptional repressor hrca | DFG54_RS14395 | Not Available | Negative | 3259489 - 3260520 | 37548.4 |
| dna repair protein recn | DFG54_RS14400 | Not Available | Positive | 3260659 - 3262323 | 59504.4 |
| ferric iron uptake transcriptional regulator | DFG54_RS14405 | Not Available | Negative | 3262977 - 3263387 | 15766.8 |
| outer membrane protein assembly factor bame | DFG54_RS14410 | Not Available | Positive | 3263491 - 3263886 | 14881.8 |
| rnfh family protein | DFG54_RS14415 | Not Available | Negative | 3264109 - 3264405 | 10420.5 |
| type ii toxin-antitoxin system rata family toxin | DFG54_RS14420 | Not Available | Negative | 3264408 - 3264839 | 16158.3 |
| ssra-binding protein smpb | DFG54_RS14425 | Not Available | Positive | 3264900 - 3265403 | 19225.2 |
| s8 family serine peptidase | DFG54_RS14430 | Not Available | Negative | 3265628 - 3268087 | 89119.3 |
| Tmrna,resume consensus sequence (at 87): tttagttgccaacgacga | Not Available | Not Available | Positive | 3268221 - 3268617 | Not Available |
| helix-turn-helix transcriptional regulator | DFG54_RS14440 | Not Available | Negative | 3268851 - 3269090 | 8700.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

