Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1328 domain-containing protein | DFG54_RS00960 | Not Available | Positive | 215265 - 215423 | 5640.36 |
| gnat family n-acetyltransferase | DFG54_RS00965 | Not Available | Negative | 215526 - 216008 | 17655.2 |
| d-alanine--d-alanine ligase | DFG54_RS00970 | Not Available | Negative | 216005 - 217111 | 39694.6 |
| scp2 domain-containing protein | DFG54_RS00975 | Not Available | Positive | 217284 - 217928 | 22847.3 |
| ubiquinone biosynthesis regulatory protein kinase ubib | DFG54_RS00980 | Not Available | Positive | 217925 - 219598 | 62759.3 |
| pseudouridine synthase | DFG54_RS00985 | Not Available | Positive | 219647 - 220468 | 30011.1 |
| duf2059 domain-containing protein | DFG54_RS00990 | Not Available | Negative | 221294 - 221872 | 21456.2 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | DFG54_RS00995 | Not Available | Positive | 221931 - 222362 | 16028.3 |
| lysophosphatidylcholine acyltransferase | DFG54_RS01000 | Not Available | Positive | 222365 - 222994 | 23613.7 |
| isoaspartyl peptidase/l-asparaginase family protein | DFG54_RS01005 | Not Available | Positive | 223054 - 224061 | 34951.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

