Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | DFG54_RS13835 | Not Available | Negative | 3136224 - 3138686 | 88073.9 |
| dna gyrase subunit a | DFG54_RS13840 | Not Available | Negative | 3138879 - 3141578 | 98944.2 |
| s-methyl-5-thioribose-1-phosphate isomerase | DFG54_RS13845 | Not Available | Negative | 3141788 - 3142852 | 37411.8 |
| duf3011 domain-containing protein | DFG54_RS13850 | Not Available | Negative | 3142900 - 3143586 | 25523.6 |
| ef-p lysine aminoacylase epma | DFG54_RS13855 | Not Available | Negative | 3143698 - 3144672 | 35945.1 |
| nad-dependent dna ligase liga | DFG54_RS13860 | Not Available | Negative | 3144669 - 3147170 | 90352.9 |
| pyridoxal phosphate-dependent aminotransferase | DFG54_RS13865 | Not Available | Positive | 3147357 - 3148481 | 39877.4 |
| cell division protein zipa | DFG54_RS13870 | Not Available | Negative | 3148663 - 3149397 | 26955.5 |
| chromosome segregation protein smc | DFG54_RS13875 | Not Available | Negative | 3149454 - 3152957 | 129863.0 |
| hypothetical protein | DFG54_RS23720 | Not Available | Negative | 3153136 - 3153420 | 10299.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

