Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium/sugar symporter | DFG54_RS12760 | Not Available | Negative | 2912109 - 2913671 | 56162.5 |
| glycoside hydrolase family 3 protein | DFG54_RS12765 | Not Available | Negative | 2913932 - 2916550 | 92060.6 |
| phox family protein | DFG54_RS12770 | Not Available | Positive | 2916981 - 2918936 | 69529.9 |
| glycerophosphodiester phosphodiesterase | DFG54_RS23335 | Not Available | Negative | 2918992 - 2919580 | 20885.6 |
| glucose-6-phosphate isomerase | DFG54_RS12785 | Not Available | Negative | 2919636 - 2921150 | 54179.4 |
| aspartate 1-decarboxylase | DFG54_RS12790 | Not Available | Negative | 2921147 - 2921527 | 13619.2 |
| pantoate--beta-alanine ligase | DFG54_RS12795 | Not Available | Negative | 2921635 - 2922489 | 30708.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DFG54_RS12800 | Not Available | Negative | 2922486 - 2923301 | 28496.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DFG54_RS12805 | Not Available | Negative | 2923337 - 2923822 | 17087.7 |
| polynucleotide adenylyltransferase pcnb | DFG54_RS12810 | Not Available | Negative | 2923826 - 2925193 | 51037.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

