Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate dehydrogenase | DFG54_RS12710 | Not Available | Positive | 2900119 - 2901171 | 37636.1 |
| dmt family transporter | DFG54_RS12715 | Not Available | Positive | 2901165 - 2902076 | 33105.3 |
| aspartate/glutamate racemase family protein | DFG54_RS12720 | Not Available | Positive | 2902221 - 2902925 | 25121.4 |
| glycerophosphodiester phosphodiesterase | DFG54_RS12725 | Not Available | Positive | 2903120 - 2904381 | 46176.8 |
| phosphatase pap2 family protein | DFG54_RS12730 | Not Available | Negative | 2904525 - 2905256 | 27007.1 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DFG54_RS12735 | Not Available | Negative | 2905237 - 2906502 | 45250.4 |
| sensor histidine kinase | DFG54_RS12740 | Not Available | Positive | 2906624 - 2907850 | 43914.5 |
| response regulator transcription factor | DFG54_RS12745 | Not Available | Positive | 2907847 - 2908422 | 21009.2 |
| glycoside hydrolase family 5 protein | DFG54_RS12750 | Not Available | Negative | 2908744 - 2909745 | 35832.4 |
| eal domain-containing protein | DFG54_RS12755 | Not Available | Positive | 2910172 - 2912028 | 67667.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

