Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat domain-containing protein | DFG54_RS12610 | Not Available | Negative | 2878886 - 2879953 | 38326.0 |
| cbs domain-containing protein | DFG54_RS12615 | Not Available | Negative | 2880214 - 2881266 | 39299.1 |
| helix-turn-helix transcriptional regulator | DFG54_RS12620 | Not Available | Negative | 2881565 - 2882296 | 27752.0 |
| cbass oligonucleotide cyclase | DFG54_RS12625 | Not Available | Positive | 2882649 - 2883599 | 35876.4 |
| hypothetical protein | DFG54_RS12630 | Not Available | Positive | 2883596 - 2884093 | 18337.5 |
| aaa family atpase | DFG54_RS12635 | Not Available | Positive | 2884090 - 2884986 | 32984.6 |
| glycerophosphodiester phosphodiesterase | DFG54_RS12640 | Not Available | Positive | 2884986 - 2886147 | 41608.8 |
| 3'-5' exonuclease | DFG54_RS12645 | Not Available | Positive | 2886144 - 2886701 | 20470.4 |
| duf4238 domain-containing protein | DFG54_RS12650 | Not Available | Positive | 2886774 - 2887724 | 36022.3 |
| hypothetical protein | DFG54_RS23700 | Not Available | Negative | 2887896 - 2888603 | 26518.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

