Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DFG54_RS12460 | Not Available | Positive | 2836796 - 2838205 | 52185.6 |
| duf3320 domain-containing protein | DFG54_RS12465 | Not Available | Negative | 2838225 - 2843831 | 206125.0 |
| abortive infection family protein | DFG54_RS12470 | Not Available | Positive | 2843945 - 2844715 | 28293.5 |
| glycerophosphodiester phosphodiesterase | DFG54_RS23920 | Not Available | Positive | 2845961 - 2846182 | 8217.13 |
| glycerophosphodiester phosphodiesterase | DFG54_RS23925 | Not Available | Negative | 2846081 - 2846842 | 27486.9 |
| protein adenylyltransferase selo family protein | DFG54_RS12480 | Not Available | Positive | 2847135 - 2848949 | 66615.7 |
| toxin-activating lysine-acyltransferase | DFG54_RS12485 | Not Available | Positive | 2848939 - 2849370 | 16461.0 |
| abc transporter permease | DFG54_RS12490 | Not Available | Positive | 2849433 - 2850710 | 45768.9 |
| hypothetical protein | DFG54_RS12495 | Not Available | Negative | 2850861 - 2851379 | 19399.3 |
| hypothetical protein | DFG54_RS12500 | Not Available | Negative | 2851507 - 2852097 | 21263.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

