Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | DFG54_RS12300 | Not Available | Positive | 2795990 - 2797420 | 50785.6 |
| methylthioribulose 1-phosphate dehydratase | DFG54_RS12305 | Not Available | Positive | 2798088 - 2798741 | 24253.0 |
| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase | DFG54_RS12310 | Not Available | Positive | 2798775 - 2799341 | 21403.1 |
| acireductone synthase | DFG54_RS12315 | Not Available | Positive | 2799344 - 2800042 | 26014.5 |
| c13 family peptidase | DFG54_RS12320 | Not Available | Positive | 2800398 - 2801447 | 37178.7 |
| calcineurin-like phosphoesterase c-terminal domain-containing protein | DFG54_RS12330 | Not Available | Negative | 2801638 - 2803224 | 57513.8 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | DFG54_RS12340 | Not Available | Negative | 2803868 - 2804488 | 22176.5 |
| imidazole glycerol phosphate synthase subunit hisf | DFG54_RS12345 | Not Available | Negative | 2804478 - 2805254 | 28368.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DFG54_RS12350 | Not Available | Negative | 2805248 - 2805982 | 25730.8 |
| imidazole glycerol phosphate synthase subunit hish | DFG54_RS12355 | Not Available | Negative | 2805979 - 2806581 | 21261.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

