Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | DFG54_RS11160 | Not Available | Positive | 2511529 - 2512404 | 29686.0 |
| m13 family metallopeptidase | DFG54_RS11165 | Not Available | Positive | 2512607 - 2514697 | 76727.5 |
| thermonuclease family protein | DFG54_RS11170 | Not Available | Negative | 2514805 - 2515488 | 24837.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2515738 - 2515812 | Not Available |
| gfo/idh/moca family protein | DFG54_RS11180 | Not Available | Negative | 2515879 - 2516916 | 36696.9 |
| pqq-dependent sugar dehydrogenase | DFG54_RS11185 | Not Available | Negative | 2517132 - 2518442 | 45788.3 |
| duf2231 domain-containing protein | DFG54_RS11190 | Not Available | Negative | 2518439 - 2518855 | 14989.7 |
| gaf domain-containing sensor histidine kinase | DFG54_RS11195 | Not Available | Positive | 2519520 - 2520791 | 45225.0 |
| duf4440 domain-containing protein | DFG54_RS11200 | Not Available | Positive | 2520921 - 2521694 | 27844.0 |
| beta-n-acetylhexosaminidase family protein | DFG54_RS11210 | Not Available | Positive | 2522407 - 2524371 | 69168.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

