Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| avrbs1/avra family type iii secretion system effector | DFG54_RS10770 | Not Available | Negative | 2433943 - 2435271 | 49503.1 |
| type iii secretion system effector xoph | DFG54_RS23295 | Not Available | Negative | 2435371 - 2436441 | 39911.0 |
| glycerophosphodiester phosphodiesterase | DFG54_RS23890 | Not Available | Negative | 2436717 - 2436803 | 3199.65 |
| glycerophosphodiester phosphodiesterase | DFG54_RS10785 | Not Available | Negative | 2436901 - 2437746 | 32191.1 |
| glycerophosphodiester phosphodiesterase | DFG54_RS10790 | Not Available | Positive | 2437745 - 2438093 | 13663.0 |
| duf6119 family protein | DFG54_RS10795 | Not Available | Negative | 2438269 - 2439948 | 62666.2 |
| duf3320 domain-containing protein | DFG54_RS10800 | Not Available | Negative | 2439972 - 2446352 | 234535.0 |
| hypothetical protein | DFG54_RS23680 | Not Available | Negative | 2446439 - 2446609 | 6257.46 |
| helix-turn-helix domain-containing protein | DFG54_RS23895 | Not Available | Positive | 2446826 - 2446954 | 4568.68 |
| tannase/feruloyl esterase family alpha/beta hydrolase | DFG54_RS10810 | Not Available | Negative | 2447051 - 2448781 | 60874.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

