Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xopah/avrb family type iii secretion system effector | DFG54_RS10335 | Not Available | Positive | 2355073 - 2356134 | 39292.7 |
| lysr substrate-binding domain-containing protein | DFG54_RS10345 | Not Available | Negative | 2356655 - 2357302 | 23482.4 |
| glycerophosphodiester phosphodiesterase | DFG54_RS23670 | Not Available | Positive | 2357405 - 2357527 | 4432.35 |
| is1595-like element isxca4 family transposase | DFG54_RS10355 | Not Available | Negative | 2357545 - 2358507 | 35971.6 |
| glycerophosphodiester phosphodiesterase | DFG54_RS10360 | Not Available | Positive | 2358599 - 2358778 | 6326.57 |
| glycerophosphodiester phosphodiesterase | DFG54_RS10365 | Not Available | Positive | 2358864 - 2358995 | 5050.13 |
| is5-like element is1478 family transposase | DFG54_RS10370 | Not Available | Positive | 2359115 - 2360482 | 51779.1 |
| glycerophosphodiester phosphodiesterase | DFG54_RS10375 | Not Available | Positive | 2360505 - 2361508 | 35186.8 |
| is5-like element is1646 family transposase | DFG54_RS10385 | Not Available | Positive | 2361646 - 2362626 | 36778.4 |
| glycerophosphodiester phosphodiesterase | DFG54_RS10390 | Not Available | Positive | 2362818 - 2362949 | 4791.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

