Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | DFG54_RS09500 | Not Available | Positive | 2185244 - 2186119 | 33120.8 |
| hypothetical protein | DFG54_RS09505 | Not Available | Positive | 2186213 - 2186503 | 10284.2 |
| ethanolamine ammonia-lyase subunit eutc | DFG54_RS09510 | Not Available | Negative | 2186579 - 2187397 | 28961.6 |
| ethanolamine ammonia-lyase subunit eutb | DFG54_RS09515 | Not Available | Negative | 2187394 - 2188803 | 50174.1 |
| ethanolamine permease | DFG54_RS09520 | Not Available | Negative | 2188800 - 2190164 | 48051.2 |
| m23 family metallopeptidase | DFG54_RS09525 | Not Available | Negative | 2191023 - 2191868 | 29434.4 |
| dihydroorotase | DFG54_RS09530 | Not Available | Negative | 2191868 - 2193217 | 49149.4 |
| membrane protein insertion efficiency factor yidd | DFG54_RS09535 | Not Available | Negative | 2193214 - 2193495 | 10381.8 |
| rna polymerase-binding protein dksa | DFG54_RS09540 | Not Available | Positive | 2193586 - 2194611 | 36190.3 |
| hypothetical protein | DFG54_RS09545 | Not Available | Positive | 2194669 - 2194938 | 9512.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

