Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd-gyp domain-containing protein | DFG54_RS08980 | Not Available | Negative | 2066296 - 2067279 | 35804.6 |
| chase domain-containing protein | DFG54_RS08985 | Not Available | Negative | 2067313 - 2071407 | 150176.0 |
| duf445 domain-containing protein | DFG54_RS08990 | Not Available | Negative | 2071563 - 2072867 | 49190.8 |
| hypothetical protein | DFG54_RS08995 | Not Available | Negative | 2073471 - 2074325 | 31290.8 |
| aspartate aminotransferase family protein | DFG54_RS09000 | Not Available | Negative | 2074576 - 2075928 | 48323.3 |
| ofa family mfs transporter | DFG54_RS09005 | Not Available | Positive | 2076287 - 2077966 | 59221.5 |
| formate dehydrogenase accessory sulfurtransferase fdhd | DFG54_RS09010 | Not Available | Positive | 2077973 - 2078818 | 29651.6 |
| fdhf/ydep family oxidoreductase | DFG54_RS09015 | Not Available | Positive | 2078815 - 2081163 | 85980.8 |
| hypothetical protein | DFG54_RS09020 | Not Available | Positive | 2081153 - 2081422 | 9415.31 |
| mfs transporter | DFG54_RS09025 | Not Available | Positive | 2081834 - 2083114 | 45191.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

