Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dcmp deaminase family protein | DFG54_RS00435 | Not Available | Positive | 96942 - 97421 | 17307.7 |
| is5-like element is1646 family transposase | DFG54_RS00440 | Not Available | Negative | 97657 - 98637 | 36733.4 |
| is4-like element is1481a family transposase | DFG54_RS00450 | Not Available | Positive | 99186 - 100400 | 45705.0 |
| glycerophosphodiester phosphodiesterase | DFG54_RS23870 | Not Available | Positive | 100462 - 100581 | 4138.16 |
| rhs repeat-associated core domain-containing protein | DFG54_RS00460 | Not Available | Positive | 100707 - 104951 | 154808.0 |
| is5-like element is1478 family transposase | DFG54_RS00465 | Not Available | Negative | 104962 - 106329 | 51779.1 |
| glycerophosphodiester phosphodiesterase | DFG54_RS00470 | Not Available | Positive | 106926 - 108280 | 46850.8 |
| hypothetical protein | DFG54_RS00475 | Not Available | Positive | 108277 - 108639 | 14256.9 |
| hypothetical protein | DFG54_RS00485 | Not Available | Negative | 109024 - 109695 | 23696.7 |
| glycerophosphodiester phosphodiesterase | DFG54_RS00490 | Not Available | Negative | 109881 - 110207 | 12243.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

