Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DFG54_RS08260 | Not Available | Positive | 1877969 - 1881226 | 117758.0 |
| nucleotide 5'-monophosphate nucleosidase ppnn | DFG54_RS08265 | Not Available | Positive | 1881332 - 1882717 | 50803.3 |
| gsph/fimt family pseudopilin | DFG54_RS08270 | Not Available | Positive | 1882835 - 1883350 | 17943.5 |
| type iv pilus modification protein pilv | DFG54_RS08275 | Not Available | Positive | 1883347 - 1883820 | 17040.2 |
| pilw family protein | DFG54_RS08280 | Not Available | Positive | 1883824 - 1884978 | 39481.7 |
| pilx n-terminal domain-containing pilus assembly protein | DFG54_RS08285 | Not Available | Positive | 1884981 - 1885499 | 18395.0 |
| pilus assembly protein | DFG54_RS08290 | Not Available | Positive | 1885512 - 1889240 | 130615.0 |
| type iv pilin protein | DFG54_RS08295 | Not Available | Positive | 1889237 - 1889683 | 16221.4 |
| Trna-asn | Not Available | Not Available | Positive | 1889746 - 1889822 | Not Available |
| tfp pilus assembly protein fimt/fimu | DFG54_RS08305 | Not Available | Negative | 1889864 - 1890415 | 19437.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

