Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase | DFG54_RS08210 | Not Available | Positive | 1868176 - 1870290 | 75675.2 |
| duf2272 domain-containing protein | DFG54_RS08215 | Not Available | Negative | 1871012 - 1872073 | 37455.4 |
| carboxylating nicotinate-nucleotide diphosphorylase | DFG54_RS08220 | Not Available | Negative | 1872136 - 1873008 | 30427.6 |
| trm112 family protein | DFG54_RS08225 | Not Available | Negative | 1873017 - 1873286 | 9834.87 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DFG54_RS08230 | Not Available | Positive | 1873345 - 1873848 | 17184.8 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | DFG54_RS08235 | Not Available | Positive | 1873845 - 1874987 | 39789.5 |
| superoxide dismutase | DFG54_RS08240 | Not Available | Negative | 1875221 - 1875799 | 21625.6 |
| grx4 family monothiol glutaredoxin | DFG54_RS08245 | Not Available | Positive | 1875921 - 1876241 | 11903.5 |
| sdr family nad(p)-dependent oxidoreductase | DFG54_RS08250 | Not Available | Positive | 1876238 - 1876978 | 25090.0 |
| yhgn family naat transporter | DFG54_RS08255 | Not Available | Positive | 1876975 - 1877574 | 21704.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

