Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m13 family metallopeptidase | DFG54_RS07850 | Not Available | Negative | 1789752 - 1791857 | 76050.3 |
| m13 family metallopeptidase | DFG54_RS07855 | Not Available | Negative | 1792221 - 1794320 | 76022.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1794626 - 1794700 | Not Available |
| tonb-dependent receptor | DFG54_RS07865 | Not Available | Negative | 1794705 - 1797752 | 110126.0 |
| tonb-dependent receptor plug domain-containing protein | DFG54_RS07870 | Not Available | Negative | 1798115 - 1801105 | 108923.0 |
| iron-sulfur cluster carrier protein apbc | DFG54_RS07875 | Not Available | Positive | 1801426 - 1802277 | 29571.9 |
| dctp deaminase | DFG54_RS07885 | Not Available | Positive | 1802373 - 1802942 | 21314.3 |
| liai-liaf-like domain-containing protein | DFG54_RS07890 | Not Available | Negative | 1802969 - 1803154 | 6996.81 |
| liai-liaf-like domain-containing protein | DFG54_RS07895 | Not Available | Negative | 1803497 - 1803664 | 5797.47 |
| hit family protein | DFG54_RS07900 | Not Available | Negative | 1803692 - 1804129 | 15782.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

