Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alka n-terminal domain-containing protein | DFG54_RS07450 | Not Available | Negative | 1703276 - 1704739 | 52836.0 |
| hypothetical protein | DFG54_RS07455 | Not Available | Positive | 1704891 - 1706096 | 42242.0 |
| hypothetical protein | DFG54_RS07460 | Not Available | Positive | 1706162 - 1706407 | 8602.83 |
| duf4019 domain-containing protein | DFG54_RS07465 | Not Available | Positive | 1706520 - 1707065 | 18902.8 |
| mapeg family protein | DFG54_RS07470 | Not Available | Positive | 1707091 - 1707492 | 14531.0 |
| 5-demethoxyubiquinol-8 5-hydroxylase ubim | DFG54_RS07475 | Not Available | Positive | 1707604 - 1708782 | 41894.5 |
| glycerophosphodiester phosphodiesterase | DFG54_RS23520 | Not Available | Negative | 1708959 - 1709264 | 10636.4 |
| rna-binding s4 domain-containing protein | DFG54_RS07485 | Not Available | Negative | 1709275 - 1709517 | 8568.24 |
| hypothetical protein | DFG54_RS07490 | Not Available | Negative | 1709700 - 1710347 | 24207.7 |
| rna polymerase sigma factor | DFG54_RS07495 | Not Available | Negative | 1710378 - 1710878 | 19057.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

