Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DFG54_RS07295 | Not Available | Positive | 1664515 - 1665714 | 41513.8 |
| efflux rnd transporter permease subunit | DFG54_RS07300 | Not Available | Positive | 1665730 - 1668864 | 112075.0 |
| efflux transporter outer membrane subunit | DFG54_RS07305 | Not Available | Positive | 1668866 - 1670359 | 53176.9 |
| tetr/acrr family transcriptional regulator | DFG54_RS07310 | Not Available | Positive | 1670385 - 1671074 | 24601.3 |
| aldo/keto reductase | DFG54_RS07315 | Not Available | Positive | 1671346 - 1672329 | 35344.2 |
| lysr family transcriptional regulator | DFG54_RS07320 | Not Available | Negative | 1672657 - 1673556 | 33022.7 |
| cupin domain-containing protein | DFG54_RS07325 | Not Available | Positive | 1673738 - 1674211 | 16183.1 |
| arac family transcriptional regulator | DFG54_RS07330 | Not Available | Negative | 1674423 - 1675334 | 33209.1 |
| hypothetical protein | DFG54_RS07335 | Not Available | Positive | 1675556 - 1675765 | 7735.47 |
| hypothetical protein | DFG54_RS23650 | Not Available | Negative | 1675919 - 1676179 | 8945.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

