Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | DFG54_RS06420 | Not Available | Negative | 1474900 - 1475463 | 21078.1 |
| ycei family protein | DFG54_RS06425 | Not Available | Negative | 1475460 - 1476137 | 23836.0 |
| atp-binding protein | DFG54_RS06430 | Not Available | Positive | 1476234 - 1479794 | 129110.0 |
| hybrid sensor histidine kinase/response regulator | DFG54_RS06435 | Not Available | Positive | 1479876 - 1483418 | 128109.0 |
| atp-binding protein | DFG54_RS06440 | Not Available | Positive | 1484001 - 1487486 | 127537.0 |
| multidrug transporter subunit mdtd | DFG54_RS06445 | Not Available | Negative | 1487866 - 1489287 | 50140.3 |
| glycerophosphodiester phosphodiesterase | DFG54_RS06455 | Not Available | Positive | 1489912 - 1490057 | 5170.26 |
| uroporphyrinogen decarboxylase | DFG54_RS06460 | Not Available | Negative | 1490268 - 1491332 | 38591.3 |
| wgr domain-containing protein | DFG54_RS06465 | Not Available | Negative | 1491345 - 1491596 | 9488.28 |
| 3-dehydroquinate synthase | DFG54_RS06470 | Not Available | Negative | 1492507 - 1493619 | 38832.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

