Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | DFG54_RS06165 | Not Available | Positive | 1409305 - 1410449 | 43990.5 |
| glycerophosphodiester phosphodiesterase | DFG54_RS06175 | Not Available | Positive | 1410480 - 1412239 | 62909.4 |
| beta-galactosidase galc | DFG54_RS06185 | Not Available | Negative | 1412473 - 1414314 | 67968.4 |
| gh92 family glycosyl hydrolase | DFG54_RS06190 | Not Available | Negative | 1414532 - 1416877 | 85635.8 |
| glycoside hydrolase family 125 protein | DFG54_RS06195 | Not Available | Negative | 1417014 - 1418444 | 53248.1 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | DFG54_RS06200 | Not Available | Negative | 1418619 - 1421285 | 95031.2 |
| beta-mannosidase | DFG54_RS06205 | Not Available | Negative | 1421547 - 1424228 | 100202.0 |
| family 20 glycosylhydrolase | DFG54_RS06210 | Not Available | Negative | 1424250 - 1426706 | 87934.8 |
| glycosyl hydrolase family 18 protein | DFG54_RS06215 | Not Available | Negative | 1426856 - 1427917 | 40489.4 |
| alpha-l-fucosidase | DFG54_RS06220 | Not Available | Negative | 1427932 - 1429617 | 61838.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

