Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DFG54_RS05920 | Not Available | Negative | 1344697 - 1347333 | 95885.4 |
| glucokinase family protein | DFG54_RS05925 | Not Available | Negative | 1347440 - 1348474 | 36122.4 |
| glycerophosphodiester phosphodiesterase | DFG54_RS05930 | Not Available | Negative | 1348817 - 1350250 | 51800.6 |
| hypothetical protein | DFG54_RS05935 | Not Available | Negative | 1350567 - 1351079 | 18702.6 |
| pyrroloquinoline quinone biosynthesis protein pqqe | DFG54_RS05940 | Not Available | Negative | 1351140 - 1352270 | 40721.6 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | DFG54_RS05945 | Not Available | Negative | 1352267 - 1352545 | 10300.2 |
| pyrroloquinoline-quinone synthase pqqc | DFG54_RS05950 | Not Available | Negative | 1352542 - 1353294 | 28235.8 |
| pyrroloquinoline quinone biosynthesis protein pqqb | DFG54_RS05955 | Not Available | Negative | 1353291 - 1354190 | 32567.7 |
| pyrroloquinoline quinone precursor peptide pqqa | DFG54_RS05960 | Not Available | Negative | 1354257 - 1354337 | 2988.63 |
| rela/spot family protein | DFG54_RS05965 | Not Available | Positive | 1354643 - 1356802 | 79873.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

