Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFG54_RS05410 | Not Available | Negative | 1221053 - 1222039 | 36155.9 |
| outer membrane protein assembly factor bamd | DFG54_RS05415 | Not Available | Negative | 1222490 - 1223371 | 33509.5 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | DFG54_RS05420 | Not Available | Positive | 1223494 - 1224489 | 36152.2 |
| peptidoglycan editing factor pgef | DFG54_RS05425 | Not Available | Positive | 1224491 - 1225291 | 28237.9 |
| duf4166 domain-containing protein | DFG54_RS05430 | Not Available | Positive | 1225312 - 1225818 | 19651.8 |
| thiol-disulfide oxidoreductase dcc family protein | DFG54_RS05435 | Not Available | Positive | 1225805 - 1226224 | 15753.2 |
| methyl-accepting chemotaxis protein | DFG54_RS05440 | Not Available | Negative | 1226861 - 1228729 | 65964.5 |
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | DFG54_RS05445 | Not Available | Negative | 1229262 - 1231697 | 86489.1 |
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | DFG54_RS05455 | Not Available | Negative | 1232648 - 1234015 | 50718.8 |
| glycoside hydrolase family 15 protein | DFG54_RS05460 | Not Available | Negative | 1234012 - 1235790 | 67079.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

