Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilin | DFG54_RS05360 | Not Available | Positive | 1210417 - 1210851 | 15186.2 |
| type iv-a pilus assembly atpase pilb | DFG54_RS05365 | Not Available | Positive | 1210916 - 1212649 | 62788.8 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1212864 - 1212936 | Not Available |
| sigma-54-dependent transcriptional regulator | DFG54_RS05375 | Not Available | Negative | 1213068 - 1214462 | 50272.6 |
| sensor histidine kinase | DFG54_RS05380 | Not Available | Negative | 1214671 - 1216281 | 58705.4 |
| adp-forming succinate--coa ligase subunit beta | DFG54_RS05385 | Not Available | Positive | 1216515 - 1217684 | 41432.9 |
| succinate--coa ligase subunit alpha | DFG54_RS05390 | Not Available | Positive | 1217709 - 1218584 | 29614.0 |
| copg family ribbon-helix-helix protein | DFG54_RS05395 | Not Available | Positive | 1218688 - 1219098 | 14805.5 |
| type ii toxin-antitoxin system rele/pare family toxin | DFG54_RS05400 | Not Available | Positive | 1219102 - 1219404 | 11025.3 |
| nad+ synthase | DFG54_RS05405 | Not Available | Positive | 1219404 - 1221059 | 59604.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

