Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | DFG54_RS05200 | Not Available | Positive | 1182939 - 1183196 | 9559.09 |
| glycerophosphodiester phosphodiesterase | DFG54_RS05205 | Not Available | Positive | 1183260 - 1184095 | 30202.2 |
| is3 family transposase | DFG54_RS05210 | Not Available | Negative | 1184112 - 1185220 | 43183.8 |
| glycerophosphodiester phosphodiesterase | DFG54_RS05215 | Not Available | Positive | 1185307 - 1185594 | 10993.8 |
| glycerophosphodiester phosphodiesterase | DFG54_RS05220 | Not Available | Negative | 1185625 - 1186617 | 36892.5 |
| ggdef domain-containing protein | DFG54_RS05225 | Not Available | Positive | 1187068 - 1188024 | 35929.1 |
| hypothetical protein | DFG54_RS05230 | Not Available | Positive | 1188128 - 1188418 | 10939.1 |
| nucleotidyl transferase abieii/abigii toxin family protein | DFG54_RS05235 | Not Available | Negative | 1188574 - 1189500 | 34622.6 |
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | DFG54_RS05240 | Not Available | Negative | 1189493 - 1190251 | 28003.7 |
| duf3742 family protein | DFG54_RS05245 | Not Available | Positive | 1190476 - 1190835 | 13373.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

