Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain Xcc8004_Xcc2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
902637 bp
Thymine Count
905595 bp
Guanine Count
1672835 bp
Cytosine Count
1680108 bp
Genome Length
5161275 bp
Protein-coding Genes
4272 genes
Non-Coding Genes
214 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | DFG54_RS05150 | Not Available | Negative | 1171200 - 1171850 | 23581.7 |
| helix-turn-helix domain-containing protein | DFG54_RS05155 | Not Available | Positive | 1171953 - 1172246 | 10474.7 |
| lysr family transcriptional regulator | DFG54_RS05160 | Not Available | Negative | 1172274 - 1173158 | 32802.7 |
| helix-turn-helix transcriptional regulator | DFG54_RS05165 | Not Available | Negative | 1173911 - 1177975 | 152088.0 |
| glycerophosphodiester phosphodiesterase | DFG54_RS05170 | Not Available | Negative | 1178256 - 1178588 | 12687.8 |
| glycerophosphodiester phosphodiesterase | DFG54_RS05175 | Not Available | Negative | 1178619 - 1179721 | 39443.0 |
| glycerophosphodiester phosphodiesterase | DFG54_RS05180 | Not Available | Positive | 1179791 - 1180741 | 32858.9 |
| duf4189 domain-containing protein | DFG54_RS05185 | Not Available | Positive | 1180819 - 1181358 | 19070.7 |
| hypothetical protein | DFG54_RS05190 | Not Available | Positive | 1181756 - 1182286 | 19482.9 |
| hypothetical protein | DFG54_RS05195 | Not Available | Positive | 1182283 - 1182942 | 24595.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

