Saliniradius amylolyticus strain HMF8227

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Saliniradius

Description

Saliniradius amylolyticus strain HMF8227 is characterized by having a single replicon, which indicates a streamlined genetic structure potentially advantageous for adaptability and efficiency in its ecological niche. The strain is cataloged under the accession number NZ_CP029347.1, providing a reference point for its genomic data and facilitating further research on its genetic characteristics. As a member of the Saliniradius genus, HMF8227 is expected to exhibit unique metabolic capabilities, particularly in the breakdown of starches, as suggested by its species designation "amylolyticus." This trait may allow the strain to thrive in environments rich in polysaccharides, potentially aiding in nutrient cycling within its ecosystem. The single replicon arrangement may enhance the organism's ability to reproduce quickly and adapt to varying environmental conditions, which is often crucial for survival in competitive microbial communities. Understanding strain HMF8227's genetic and metabolic traits could provide insights into its ecological role, particularly in environments where starches are abundant and require microbial processing. Overall, Saliniradius amylolyticus strain HMF8227 presents a unique opportunity for studying microbial metabolism and ecology, particularly concerning starch degradation and its implications for nutrient cycling within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusSaliniradius
SpeciesSaliniradius amylolyticus
Strainstrain HMF8227

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saliniradius amylolyticus strain HMF8227 chromosome, complete

Gene Summary

Adenine Count

766112 bp

Thymine Count

772701 bp

Guanine Count

838934 bp

Cytosine Count

837199 bp

Genome Length

3214946 bp

Protein-coding Genes

2907 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcription termination factor rhoHMF8227_RS13995Not AvailablePositive3002751 - 300401647322.2
sigma d regulatorHMF8227_RS14000Not AvailableNegative3004111 - 300457217283.1
nad(+) diphosphataseHMF8227_RS14005Not AvailablePositive3004703 - 300551230793.8
uroporphyrinogen decarboxylaseHMF8227_RS14010Not AvailablePositive3006828 - 300789839562.8
trna epoxyqueuosine(34) reductase quegHMF8227_RS14015Not AvailableNegative3007895 - 300903743040.3
nad(p)h-hydrate dehydrataseHMF8227_RS14020Not AvailablePositive3009037 - 301054853121.6
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeHMF8227_RS14025Not AvailablePositive3010548 - 301103318280.7
n-acetylmuramoyl-l-alanine amidaseHMF8227_RS14030Not AvailablePositive3011059 - 301234247408.7
dna mismatch repair endonuclease mutlHMF8227_RS14035Not AvailablePositive3012346 - 301403763614.0
trna (adenosine(37)-n6)-dimethylallyltransferase miaaHMF8227_RS14040Not AvailablePositive3014030 - 301495635115.4

Displaying genes 2811 – 2820 of 3008 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.