Saliniradius amylolyticus strain HMF8227

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Saliniradius

Description

Saliniradius amylolyticus strain HMF8227 is characterized by having a single replicon, which indicates a streamlined genetic structure potentially advantageous for adaptability and efficiency in its ecological niche. The strain is cataloged under the accession number NZ_CP029347.1, providing a reference point for its genomic data and facilitating further research on its genetic characteristics. As a member of the Saliniradius genus, HMF8227 is expected to exhibit unique metabolic capabilities, particularly in the breakdown of starches, as suggested by its species designation "amylolyticus." This trait may allow the strain to thrive in environments rich in polysaccharides, potentially aiding in nutrient cycling within its ecosystem. The single replicon arrangement may enhance the organism's ability to reproduce quickly and adapt to varying environmental conditions, which is often crucial for survival in competitive microbial communities. Understanding strain HMF8227's genetic and metabolic traits could provide insights into its ecological role, particularly in environments where starches are abundant and require microbial processing. Overall, Saliniradius amylolyticus strain HMF8227 presents a unique opportunity for studying microbial metabolism and ecology, particularly concerning starch degradation and its implications for nutrient cycling within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusSaliniradius
SpeciesSaliniradius amylolyticus
Strainstrain HMF8227

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saliniradius amylolyticus strain HMF8227 chromosome, complete

Gene Summary

Adenine Count

766112 bp

Thymine Count

772701 bp

Guanine Count

838934 bp

Cytosine Count

837199 bp

Genome Length

3214946 bp

Protein-coding Genes

2907 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sec-independent protein translocase subunit tataHMF8227_RS13945Not AvailablePositive2993817 - 29940749386.98
sec-independent protein translocase protein tatbHMF8227_RS13950Not AvailablePositive2994077 - 299437911272.6
twin-arginine translocase subunit tatcHMF8227_RS13955Not AvailablePositive2994372 - 299511827350.2
type vi secretion system-associated protein tagoHMF8227_RS13960Not AvailablePositive2995115 - 299562719150.3
tatd family hydrolaseHMF8227_RS13965Not AvailablePositive2995629 - 299640829140.7
diguanylate cyclaseHMF8227_RS13970Not AvailablePositive2996405 - 299829472382.2
porphobilinogen synthaseHMF8227_RS13975Not AvailablePositive2998287 - 299928236362.2
guanosine-5'-triphosphate,3'-diphosphate pyrophosphataseHMF8227_RS13980Not AvailableNegative2999279 - 300079956667.3
atp-dependent rna helicase rhlbHMF8227_RS13985Not AvailableNegative3000796 - 300205847440.0
thioredoxin trxaHMF8227_RS13990Not AvailablePositive3002158 - 300248411760.0

Displaying genes 2801 – 2810 of 3008 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.