Saliniradius amylolyticus strain HMF8227

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Saliniradius

Description

Saliniradius amylolyticus strain HMF8227 is characterized by having a single replicon, which indicates a streamlined genetic structure potentially advantageous for adaptability and efficiency in its ecological niche. The strain is cataloged under the accession number NZ_CP029347.1, providing a reference point for its genomic data and facilitating further research on its genetic characteristics. As a member of the Saliniradius genus, HMF8227 is expected to exhibit unique metabolic capabilities, particularly in the breakdown of starches, as suggested by its species designation "amylolyticus." This trait may allow the strain to thrive in environments rich in polysaccharides, potentially aiding in nutrient cycling within its ecosystem. The single replicon arrangement may enhance the organism's ability to reproduce quickly and adapt to varying environmental conditions, which is often crucial for survival in competitive microbial communities. Understanding strain HMF8227's genetic and metabolic traits could provide insights into its ecological role, particularly in environments where starches are abundant and require microbial processing. Overall, Saliniradius amylolyticus strain HMF8227 presents a unique opportunity for studying microbial metabolism and ecology, particularly concerning starch degradation and its implications for nutrient cycling within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusSaliniradius
SpeciesSaliniradius amylolyticus
Strainstrain HMF8227

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saliniradius amylolyticus strain HMF8227 chromosome, complete

Gene Summary

Adenine Count

766112 bp

Thymine Count

772701 bp

Guanine Count

838934 bp

Cytosine Count

837199 bp

Genome Length

3214946 bp

Protein-coding Genes

2907 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdudHMF8227_RS12855Not AvailableNegative2735885 - 273665526926.9
galactokinaseHMF8227_RS12860Not AvailableNegative2736766 - 273791141711.6
udp-glucose--hexose-1-phosphate uridylyltransferaseHMF8227_RS12865Not AvailableNegative2737913 - 273895339568.2
udp-glucose 4-epimerase galeHMF8227_RS12870Not AvailableNegative2738962 - 273998737124.8
sodium/sugar symporterHMF8227_RS12875Not AvailableNegative2739990 - 274154956740.8
glycoside hydrolase family 2 tim barrel-domain containing proteinHMF8227_RS12880Not AvailableNegative2741670 - 2744819120281.0
glycoside hydrolase family 105 proteinHMF8227_RS12885Not AvailableNegative2744812 - 274611048881.4
polysaccharide lyase family 8 super-sandwich domain-containing proteinHMF8227_RS12890Not AvailablePositive2746474 - 2749488109380.0
hypothetical proteinHMF8227_RS12895Not AvailableNegative2749677 - 27498415814.57
duf2264 domain-containing proteinHMF8227_RS12900Not AvailableNegative2749884 - 275111346083.1

Displaying genes 2581 – 2590 of 3008 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.