Saliniradius amylolyticus strain HMF8227

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Saliniradius

Description

Saliniradius amylolyticus strain HMF8227 is characterized by having a single replicon, which indicates a streamlined genetic structure potentially advantageous for adaptability and efficiency in its ecological niche. The strain is cataloged under the accession number NZ_CP029347.1, providing a reference point for its genomic data and facilitating further research on its genetic characteristics. As a member of the Saliniradius genus, HMF8227 is expected to exhibit unique metabolic capabilities, particularly in the breakdown of starches, as suggested by its species designation "amylolyticus." This trait may allow the strain to thrive in environments rich in polysaccharides, potentially aiding in nutrient cycling within its ecosystem. The single replicon arrangement may enhance the organism's ability to reproduce quickly and adapt to varying environmental conditions, which is often crucial for survival in competitive microbial communities. Understanding strain HMF8227's genetic and metabolic traits could provide insights into its ecological role, particularly in environments where starches are abundant and require microbial processing. Overall, Saliniradius amylolyticus strain HMF8227 presents a unique opportunity for studying microbial metabolism and ecology, particularly concerning starch degradation and its implications for nutrient cycling within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusSaliniradius
SpeciesSaliniradius amylolyticus
Strainstrain HMF8227

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saliniradius amylolyticus strain HMF8227 chromosome, complete

Gene Summary

Adenine Count

766112 bp

Thymine Count

772701 bp

Guanine Count

838934 bp

Cytosine Count

837199 bp

Genome Length

3214946 bp

Protein-coding Genes

2907 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cold shock domain-containing protein cspdHMF8227_RS08045Not AvailablePositive1711756 - 17119748001.36
nadp-dependent isocitrate dehydrogenaseHMF8227_RS08050Not AvailableNegative1712075 - 171429782210.2
pseudouridine synthaseHMF8227_RS08055Not AvailablePositive1714450 - 171509124285.4
nudix hydrolaseHMF8227_RS08060Not AvailablePositive1715116 - 171558617901.5
trna 2-thiouridine(34) synthase mnmaHMF8227_RS08065Not AvailablePositive1715689 - 171679841582.8
high frequency lysogenization protein hfldHMF8227_RS08070Not AvailablePositive1716791 - 171742923341.3
adenylosuccinate lyaseHMF8227_RS08075Not AvailablePositive1717440 - 171881351440.6
adenylate/guanylate cyclase domain-containing proteinHMF8227_RS08080Not AvailablePositive1718888 - 172012346154.7
duf4826 family proteinHMF8227_RS08085Not AvailableNegative1720081 - 172049715833.5
fad-binding and (fe-s)-binding domain-containing proteinHMF8227_RS08090Not AvailableNegative1720475 - 1723519113472.0

Displaying genes 1661 – 1670 of 3008 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.