Escherichia coli strain ECCRA-119

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain ECCRA-119 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, thriving optimally at 37°C within a mesophilic temperature range. This strain is motile due to the presence of flagella and can be found in various arrangements, including pairs and singles. ECCRA-119 is biotically associated with a wide range of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and many others, indicating its adaptability to diverse environments. The strain possesses two replicons and is characterized by having two membranes, which is typical for Gram-negative bacteria. Its free-living nature allows it to exist independently in various ecological niches, contributing to its widespread distribution. ECCRA-119 is associated with numerous health effects, particularly in humans. It is known to cause urinary tract infections (UTIs), gastrointestinal infections, and other serious conditions such as neonatal meningitis and septicemia. The strain's pathogenicity highlights its role in various diseases, including enteric infections, food poisoning, and conditions leading to hemolytic uremic syndrome (HUS). The ecological insight from ECCRA-119's diverse host range underscores its significant role in both environmental and clinical settings. Its ability to cause a spectrum of infections emphasizes the importance of understanding such strains in microbiology, particularly regarding their impact on human health and disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain ECCRA-119

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain ECCRA-119
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain ECCRA-119


Gene Summary

Adenine Count

12960 bp

Thymine Count

11667 bp

Guanine Count

11284 bp

Cytosine Count

10250 bp

Genome Length

46161 bp

Protein-coding Genes

61 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
quaternary ammonium compound efflux smr transporter qace delta 1C7235_RS25350Not AvailableNegative7702 - 804912332.6
is6-like element is26 family transposaseC7235_RS25355Not AvailableNegative8166 - 900431552.9
duf1010 domain-containing proteinC7235_RS25360Not AvailableNegative9010 - 930010598.1
trimethoprim-resistant dihydrofolate reductase dfra12C7235_RS25365Not AvailableNegative9412 - 990918127.9
class 1 integron integrase inti1C7235_RS25370Not AvailablePositive10054 - 1106738324.3
is6-like element is26 family transposaseC7235_RS27715Not AvailablePositive11270 - 1162012550.7
is6-like element is26 family transposaseC7235_RS25380Not AvailablePositive11763 - 1224217938.7
is21-like element is100 family transposaseC7235_RS25390Not AvailablePositive12330 - 1335239903.2
is21-like element is100kyp family helper atpase istbC7235_RS25395Not AvailablePositive13349 - 1413129455.8
is6-like element is26 family transposaseC7235_RS25400Not AvailablePositive14199 - 1529938734.4

Displaying genes 71 – 80 of 228 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total