Escherichia coli strain ECCRA-119

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain ECCRA-119 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, thriving optimally at 37°C within a mesophilic temperature range. This strain is motile due to the presence of flagella and can be found in various arrangements, including pairs and singles. ECCRA-119 is biotically associated with a wide range of hosts, including Homo sapiens, Gallus gallus, Bos taurus, and many others, indicating its adaptability to diverse environments. The strain possesses two replicons and is characterized by having two membranes, which is typical for Gram-negative bacteria. Its free-living nature allows it to exist independently in various ecological niches, contributing to its widespread distribution. ECCRA-119 is associated with numerous health effects, particularly in humans. It is known to cause urinary tract infections (UTIs), gastrointestinal infections, and other serious conditions such as neonatal meningitis and septicemia. The strain's pathogenicity highlights its role in various diseases, including enteric infections, food poisoning, and conditions leading to hemolytic uremic syndrome (HUS). The ecological insight from ECCRA-119's diverse host range underscores its significant role in both environmental and clinical settings. Its ability to cause a spectrum of infections emphasizes the importance of understanding such strains in microbiology, particularly regarding their impact on human health and disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain ECCRA-119

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain ECCRA-119
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain ECCRA-119 plasmid pTB203, complete

Gene Summary

Adenine Count

12960 bp

Thymine Count

11667 bp

Guanine Count

11284 bp

Cytosine Count

10250 bp

Genome Length

46161 bp

Protein-coding Genes

61 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugative transfer relaxase/helicase traiC7235_RS25475Not AvailableNegative21551 - 26821192125.0
type iv conjugative transfer system coupling protein tradC7235_RS25480Not AvailableNegative26821 - 2902883585.9
conjugal transfer complement resistance protein tratC7235_RS25485Not AvailableNegative29281 - 3001225920.2
hypothetical proteinC7235_RS25490Not AvailableNegative30044 - 3054719372.4
is6-like element is26 family transposaseC7235_RS25500Not AvailableNegative30562 - 33383102533.0
conjugal transfer pilus assembly protein trahC7235_RS25505Not AvailableNegative33380 - 3475350264.2
p-type conjugative transfer protein trbjC7235_RS25510Not AvailableNegative34753 - 3511513293.5
type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbbC7235_RS25515Not AvailableNegative35045 - 3559019786.0
type-f conjugative transfer system pilin chaperone traqC7235_RS25520Not AvailableNegative35577 - 3586110965.5
conjugal transfer protein trbaC7235_RS25525Not AvailableNegative35980 - 3632712958.5

Displaying genes 91 – 100 of 228 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total